CDS

Accession Number TCMCG057C26530
gbkey CDS
Protein Id XP_018490924.1
Location complement(join(29137095..29138018,29138527..29140269,29140351..>29140365))
Gene LOC108861539
GeneID 108861539
Organism Raphanus sativus

Protein

Length 896aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018635422.1
Definition PREDICTED: eukaryotic translation initiation factor 3 subunit C [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category J
Description Component of the eukaryotic translation initiation factor 3 (eIF-3) complex, which is involved in protein synthesis of a specialized repertoire of mRNAs and, together with other initiation factors, stimulates binding of mRNA and methionyl-tRNAi to the 40S ribosome. The eIF-3 complex specifically targets and initiates translation of a subset of mRNAs involved in cell proliferation
KEGG_TC -
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
ko00001        [VIEW IN KEGG]
ko01000        [VIEW IN KEGG]
ko01002        [VIEW IN KEGG]
ko03012        [VIEW IN KEGG]
ko04121        [VIEW IN KEGG]
KEGG_ko ko:K03252        [VIEW IN KEGG]
ko:K08597        [VIEW IN KEGG]
EC 3.4.22.68        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway ko03013        [VIEW IN KEGG]
map03013        [VIEW IN KEGG]
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0003676        [VIEW IN EMBL-EBI]
GO:0003723        [VIEW IN EMBL-EBI]
GO:0003729        [VIEW IN EMBL-EBI]
GO:0005488        [VIEW IN EMBL-EBI]
GO:0005515        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005634        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0005829        [VIEW IN EMBL-EBI]
GO:0005852        [VIEW IN EMBL-EBI]
GO:0006412        [VIEW IN EMBL-EBI]
GO:0006413        [VIEW IN EMBL-EBI]
GO:0006518        [VIEW IN EMBL-EBI]
GO:0006807        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008152        [VIEW IN EMBL-EBI]
GO:0009058        [VIEW IN EMBL-EBI]
GO:0009059        [VIEW IN EMBL-EBI]
GO:0009987        [VIEW IN EMBL-EBI]
GO:0010467        [VIEW IN EMBL-EBI]
GO:0019538        [VIEW IN EMBL-EBI]
GO:0031369        [VIEW IN EMBL-EBI]
GO:0032991        [VIEW IN EMBL-EBI]
GO:0034641        [VIEW IN EMBL-EBI]
GO:0034645        [VIEW IN EMBL-EBI]
GO:0043043        [VIEW IN EMBL-EBI]
GO:0043170        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043603        [VIEW IN EMBL-EBI]
GO:0043604        [VIEW IN EMBL-EBI]
GO:0044237        [VIEW IN EMBL-EBI]
GO:0044238        [VIEW IN EMBL-EBI]
GO:0044249        [VIEW IN EMBL-EBI]
GO:0044260        [VIEW IN EMBL-EBI]
GO:0044267        [VIEW IN EMBL-EBI]
GO:0044271        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0071704        [VIEW IN EMBL-EBI]
GO:0097159        [VIEW IN EMBL-EBI]
GO:1901363        [VIEW IN EMBL-EBI]
GO:1901564        [VIEW IN EMBL-EBI]
GO:1901566        [VIEW IN EMBL-EBI]
GO:1901576        [VIEW IN EMBL-EBI]

Sequence

CDS:  
CGTTTTTTCGCCCAGGGTGGTAGTGACAGCGAGGATGAGAGCGATATCGAGCAAGAGATCCAGGAGGTTCAGAACACGGACATCAACAACCGTTACCTCCAGGGCGGCAGCGACGACGATGACGACACGGACACCAAGCGTGTCATCAAGCCGACCAAGGACAAGCGTTTCGAGGAGATGACGCACACCGTCGAGCAGATGAAGAACGCTATGAAGATCAACGATTGGGTCAGCCTCCAGGAGAATTTCGACAAGGTCAACAAGCAGCTCGAGAAGGTCATGAGGATCACGGAGGCTGTCAAGCCTCCTACCTTGTACATCAAGACGCTCGTTATGCTTGAGGATTTCTTGAACGAGGCTCTGGCTAATAAGGAAGCGAAGAAGAAGATGAGTCCTAGCAACTCCAAGGCGTTGAACGCGATGAGGCAGAAGCTGAAGAAGAACAATAAGCTGTACGAAGATGATATCAACAAGTACAGGGAGGCTCCGGAAGTTGAGGAGGAGAATGAGCCAGAGGATGAGGATGATGACGATGAGGAAGGCGAGAGTGATTTTGAGGACGATGATGTTAGCAAAGGGGATGTGACTGACGAGGAGGTTGATGAGCCTGTTGATAACCGATGGGAGACTATGCTTAACAAGAAAGATAAGCAGATGGAGAAGCTGCTTAGTAAAGATCCTAAGGAGATCACCTGGGACTGGGTCAACCAGAAGTTTAAGGAGATTATGGCTGCTCGTGGGAGGAAGGGGACTGCTCGTTTTGACTTGGTTGATCAGCTTACACACTTGACCAAGATTGCCAAGACTCCTGCTCAGAAGCTCGAGATCTTGTTCAGCGTTATCTCAGCTCAGTTCGATGTGAATCCAGGTCTCACCGGACATATGCCTATCAAGGTCTGGAAGAAATGCGTGCTCAACATGCTCACCATACTGGACATTCTCGTGAAGTACACTAACATCGTTGTGGACGACACAATCGAACCTGATGAGAATGAAACTTCGAAGCCAGCTGATTATGATGGAACTATCCGTGTCTGGGGGAATTTGGTTGCGTTCATTGAGAGGATCGATACTGAGTTTTTCAAGAGTTTGCAGTCCATTGACCCTCACACCCGTGAGTATGTTGAGAGACTGAGAGATGAGCCCATGTTGTTGGCCCTTGCTCAGAACATCCAGGACTACTTTGAGCGGATGGGTGATTACAAAGCTGCTGCTAAGGTAGCCTTGAGACGAGTTGAGTCAGTATATTACAAGCCCCAGGAAGTTTATGAAGCTATGAGGAAGCTGGCTGAGTTGGTTGAAGAAAATGAAGAAGCTGAGGATGCCGAAGAGGAAAGTGGACCTATTTCTTCATTCATTGTTGTTCCTGAGGTTGTTCCCCGTAAGCCTACGTTCCCGGAGAGTGGCCGAGCAATGATGGATACTCTTGTGTCTCTTATCTACCGAAATGGAGATGAGCGGACCAAGGCACGTGCAATGCTATGTGATATTTATCACCATGCCTTAATGGACAACTTTGGGACTGCTAGAGACTTGTTGCTAATGAGTCATCTCCAAGACAACATTCAGCACATGGATATCTCAACACAGATTCTCTTCAACAGGACCATGGCGCAGCTTGGCCTTTGTGCCTTCCGTGTTGGTATGATCACTGAATCCCATAGCTGCCTCTCCGAACTCTACTCTGGTCAGAGAGTGAGGGAGTTACTTGCCCAAGGCGTTTCTCAAAGTCGATACCATGAGAAGACACCCGAACAGGAAAGGATGGAGAGGAGAAGGCAAATGCCATACCACATGCACATAAACCTCGAGCTCCTGGAGGCTGTTCACCTCATCGGTGCCATGCTACTTGAAGTCCCAAACATGGCGGCAAACTCGTTTGAAGCCAGACGCAGAGTGATCAGCAAGAATTTCCGTCGCCTGCTTGAGATCAGCGAGAGGCAAGCGTTCAATGCACCACCCGAAAATGTACGTGATCACGTCATGGCAGCCACCAGAGCCCTGACCAAAGGAGATTTCCAGACCGCGTTCGATGTTTTGAACTCTCTTGATGTCTGGAGAATGCTCAAGAACCGGGACAGTATCCTCGACATGGTGAAAGCTAGGATCAAGGAAGAGGCTCTAAGGACTTACCTGTTCACATACTCGAGCTCCTATGAGTCCCTGAGCCTTGAACAGCTGGCTAAGATGTTTGACGTCACCGAAGCACATGTTCACAGCATTGTGAGTAAGATGATGATCAATGAAGAGCTTCACGCAAGCTGGGACCAGCCAACACGATGCATCGTCTTCCATGAAGTGCAACACAGCAGATTACAGTCATTGGCTTTCCAGCTAACCGAGAAACTATCGGTTTTGGCAGAGAGTAATGAAAGGGCAATGGAAGCAAGGACCGGTGGAGGTGGTCTTGATCTGAGTTCGAGGAGAAGGGACAACAATCAGGACTATGCAGCAGCATCAGGTGGTGGGAGATGGCAGGACAACAACATGAGTTATGGACAAGGAAGACAAGGTAACAACAGATCTGGATATGGAGGAAGACCAGGACAGCCTAGAGACTGGTCGGGCCAGAACCGAGGAGGAGGATATGCAGCAAGAGCTGGGTCGGGAAACAGAGGTGGTGGTATGCAAATGGATGGCTCAACCCGTATGGTGAGTCTTAACCGTGGTGTTCGAGCTTAA
Protein:  
MSSRFFAQGGSDSEDESDIEQEIQEVQNTDINNRYLQGGSDDDDDTDTKRVIKPTKDKRFEEMTHTVEQMKNAMKINDWVSLQENFDKVNKQLEKVMRITEAVKPPTLYIKTLVMLEDFLNEALANKEAKKKMSPSNSKALNAMRQKLKKNNKLYEDDINKYREAPEVEEENEPEDEDDDDEEGESDFEDDDVSKGDVTDEEVDEPVDNRWETMLNKKDKQMEKLLSKDPKEITWDWVNQKFKEIMAARGRKGTARFDLVDQLTHLTKIAKTPAQKLEILFSVISAQFDVNPGLTGHMPIKVWKKCVLNMLTILDILVKYTNIVVDDTIEPDENETSKPADYDGTIRVWGNLVAFIERIDTEFFKSLQSIDPHTREYVERLRDEPMLLALAQNIQDYFERMGDYKAAAKVALRRVESVYYKPQEVYEAMRKLAELVEENEEAEDAEEESGPISSFIVVPEVVPRKPTFPESGRAMMDTLVSLIYRNGDERTKARAMLCDIYHHALMDNFGTARDLLLMSHLQDNIQHMDISTQILFNRTMAQLGLCAFRVGMITESHSCLSELYSGQRVRELLAQGVSQSRYHEKTPEQERMERRRQMPYHMHINLELLEAVHLIGAMLLEVPNMAANSFEARRRVISKNFRRLLEISERQAFNAPPENVRDHVMAATRALTKGDFQTAFDVLNSLDVWRMLKNRDSILDMVKARIKEEALRTYLFTYSSSYESLSLEQLAKMFDVTEAHVHSIVSKMMINEELHASWDQPTRCIVFHEVQHSRLQSLAFQLTEKLSVLAESNERAMEARTGGGGLDLSSRRRDNNQDYAAASGGGRWQDNNMSYGQGRQGNNRSGYGGRPGQPRDWSGQNRGGGYAARAGSGNRGGGMQMDGSTRMVSLNRGVRA